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IAML
IIAS
Université de Reims Champagne-Ardenne CHU de Reims
IAML Integrated
AutoML for
Medical Labs

Integrated workflow

  • Discover IAML
  • Overview
  • Quick Start
  • Worked example
  • 01 / Build
  • 02 / Evaluate
  • 03 / Explain
  • Study reporting

Pipeline API & advanced use

  • Customize IAML
  • Pipeline API
    • Build and adapt a pipeline
    • Configure a complete study
    • Pipeline and study API reference
    • Examples
  • Component availability
  • Extending IAML
  • How it works
  • Python API reference
    • iaml
      • iaml.actionable
      • iaml.actionables
        • iaml.actionables.boosting
          • iaml.actionables.boosting.act_adaboost
        • iaml.actionables.cleaning
          • iaml.actionables.cleaning.act_categorical_imputer
          • iaml.actionables.cleaning.act_count_vectorizer
          • iaml.actionables.cleaning.act_drop_categorical_column
          • iaml.actionables.cleaning.act_drop_date_column
          • iaml.actionables.cleaning.act_drop_high_cardinality_categorical
          • iaml.actionables.cleaning.act_drop_numerical_column
          • iaml.actionables.cleaning.act_drop_textual_column
          • iaml.actionables.cleaning.act_encode_target_column
          • iaml.actionables.cleaning.act_frequency_encoder
          • iaml.actionables.cleaning.act_hashing_vectorizer
          • iaml.actionables.cleaning.act_knn_imputer
          • iaml.actionables.cleaning.act_mean_column
          • iaml.actionables.cleaning.act_mice
          • iaml.actionables.cleaning.act_missing_count_feature
          • iaml.actionables.cleaning.act_missing_indicator
          • iaml.actionables.cleaning.act_onehot
          • iaml.actionables.cleaning.act_ordinal_encoder
          • iaml.actionables.cleaning.act_rare_category_grouper
          • iaml.actionables.cleaning.act_simple_imputer
          • iaml.actionables.cleaning.act_split_date
          • iaml.actionables.cleaning.act_target_encoder
          • iaml.actionables.cleaning.act_text_normalizer
          • iaml.actionables.cleaning.act_tf_idf
          • iaml.actionables.cleaning.act_word2vec
        • iaml.actionables.features_precleaning
          • iaml.actionables.features_precleaning.act_coerce_numeric_strings
          • iaml.actionables.features_precleaning.act_date_converter
          • iaml.actionables.features_precleaning.act_drop_bad_quality_rows
          • iaml.actionables.features_precleaning.act_drop_duplicate_rows
          • iaml.actionables.features_precleaning.act_drop_high_missing_columns
          • iaml.actionables.features_precleaning.act_drop_id_like_columns
          • iaml.actionables.features_precleaning.act_normalize_column_names
          • iaml.actionables.features_precleaning.act_sentinel_to_na_n
          • iaml.actionables.features_precleaning.act_trim_space
        • iaml.actionables.features_preprocessing
          • iaml.actionables.features_preprocessing.act_cyclical_date_encoding
          • iaml.actionables.features_preprocessing.act_fast_ica
          • iaml.actionables.features_preprocessing.act_feature_agglomeration
          • iaml.actionables.features_preprocessing.act_k_bins_discretizer
          • iaml.actionables.features_preprocessing.act_k_means_features
          • iaml.actionables.features_preprocessing.act_kernel_pca
          • iaml.actionables.features_preprocessing.act_log_transformer
          • iaml.actionables.features_preprocessing.act_nystroem
          • iaml.actionables.features_preprocessing.act_pca
          • iaml.actionables.features_preprocessing.act_polynomial_features
          • iaml.actionables.features_preprocessing.act_power_transformer
          • iaml.actionables.features_preprocessing.act_quantile_transformer
          • iaml.actionables.features_preprocessing.act_rbf_sampler
          • iaml.actionables.features_preprocessing.act_select_percentile
          • iaml.actionables.features_preprocessing.act_sparse_random_projection
          • iaml.actionables.features_preprocessing.act_truncated_svd
        • iaml.actionables.features_selection
          • iaml.actionables.features_selection.act_permutation_importance_selector
          • iaml.actionables.features_selection.act_remove_high_correlated_column
          • iaml.actionables.features_selection.act_remove_low_variance_column
          • iaml.actionables.features_selection.act_rfe
          • iaml.actionables.features_selection.act_select_from_model
          • iaml.actionables.features_selection.act_select_k_best
          • iaml.actionables.features_selection.act_vif_selector
        • iaml.actionables.imbalance
          • iaml.actionables.imbalance.act_adasyn
          • iaml.actionables.imbalance.act_borderline_smote
          • iaml.actionables.imbalance.act_near_miss
          • iaml.actionables.imbalance.act_random_over_sampling
          • iaml.actionables.imbalance.act_random_under_sampler
          • iaml.actionables.imbalance.act_smote
          • iaml.actionables.imbalance.act_smote_tomek
          • iaml.actionables.imbalance.act_smoteenn
          • iaml.actionables.imbalance.act_tomek_links
        • iaml.actionables.normalize
          • iaml.actionables.normalize.act_max_abs_scaler
          • iaml.actionables.normalize.act_minmax_scaler
          • iaml.actionables.normalize.act_normalizer
          • iaml.actionables.normalize.act_robust_scaler
          • iaml.actionables.normalize.act_standard_scaler
        • iaml.actionables.predictors
          • iaml.actionables.predictors.classifier
            • iaml.actionables.predictors.classifier.act_bagging_classifier
            • iaml.actionables.predictors.classifier.act_bernoulli_nb
            • iaml.actionables.predictors.classifier.act_catboost_classifier
            • iaml.actionables.predictors.classifier.act_complement_nb
            • iaml.actionables.predictors.classifier.act_decision_tree_classifier
            • iaml.actionables.predictors.classifier.act_extra_trees_classifier
            • iaml.actionables.predictors.classifier.act_gaussian_nb
            • iaml.actionables.predictors.classifier.act_hist_gradient_boosting_classifier
            • iaml.actionables.predictors.classifier.act_knn
            • iaml.actionables.predictors.classifier.act_light_gbm_classifier
            • iaml.actionables.predictors.classifier.act_linear_discriminant_analysis
            • iaml.actionables.predictors.classifier.act_linear_svc
            • iaml.actionables.predictors.classifier.act_logistic_regression
            • iaml.actionables.predictors.classifier.act_mlp_classifier
            • iaml.actionables.predictors.classifier.act_multinomial_nb
            • iaml.actionables.predictors.classifier.act_passive_aggressive_classifier
            • iaml.actionables.predictors.classifier.act_quadratic_discriminant_analysis
            • iaml.actionables.predictors.classifier.act_randomforest
            • iaml.actionables.predictors.classifier.act_ridge_classifier
            • iaml.actionables.predictors.classifier.act_sgd_classifier
            • iaml.actionables.predictors.classifier.act_svm_svc
            • iaml.actionables.predictors.classifier.act_xgboost
          • iaml.actionables.predictors.regressor
            • iaml.actionables.predictors.regressor.act_ada_boost_regressor
            • iaml.actionables.predictors.regressor.act_ard_regression
            • iaml.actionables.predictors.regressor.act_catboost_regressor
            • iaml.actionables.predictors.regressor.act_decision_tree_regressor
            • iaml.actionables.predictors.regressor.act_elastic_net_regressor
            • iaml.actionables.predictors.regressor.act_extra_trees_regressor
            • iaml.actionables.predictors.regressor.act_gaussian_process_regressor
            • iaml.actionables.predictors.regressor.act_gboost_regressor
            • iaml.actionables.predictors.regressor.act_hist_gradient_boosting_regressor
            • iaml.actionables.predictors.regressor.act_huber_regressor
            • iaml.actionables.predictors.regressor.act_knn_regressor
            • iaml.actionables.predictors.regressor.act_lasso_regressor
            • iaml.actionables.predictors.regressor.act_light_gbm_regressor
            • iaml.actionables.predictors.regressor.act_linear_regression
            • iaml.actionables.predictors.regressor.act_mlp_regressor
            • iaml.actionables.predictors.regressor.act_poisson_regressor
            • iaml.actionables.predictors.regressor.act_quantile_regressor
            • iaml.actionables.predictors.regressor.act_randomforest_regressor
            • iaml.actionables.predictors.regressor.act_ransac_regressor
            • iaml.actionables.predictors.regressor.act_ridge_regressor
            • iaml.actionables.predictors.regressor.act_sgd_regressor
            • iaml.actionables.predictors.regressor.act_svm_svr
            • iaml.actionables.predictors.regressor.act_xgboost_regressor
          • iaml.actionables.predictors.survival
            • iaml.actionables.predictors.survival.act_aalen_additive_model
            • iaml.actionables.predictors.survival.act_cox
            • iaml.actionables.predictors.survival.act_coxnet_survival_analysis
            • iaml.actionables.predictors.survival.act_extra_survival_trees
            • iaml.actionables.predictors.survival.act_fast_survival_svm
            • iaml.actionables.predictors.survival.act_gradient_boosting_survival_analysis
            • iaml.actionables.predictors.survival.act_random_survival_forest
            • iaml.actionables.predictors.survival.act_survival_component_wise_gboost
            • iaml.actionables.predictors.survival.act_survival_tree
            • iaml.actionables.predictors.survival.act_survival_xgboost
            • iaml.actionables.predictors.survival.act_weibull_aft
      • iaml.cache
      • iaml.cache_keys
      • iaml.candidate
      • iaml.core_dispatcher
      • iaml.data_type
      • iaml.dataset
      • iaml.decorators
        • iaml.decorators.all
        • iaml.decorators.is_step
        • iaml.decorators.runner
      • iaml.explainers
      • iaml.explanation
      • iaml.flow
        • iaml.flow.compiler
        • iaml.flow.inspection
        • iaml.flow.model
        • iaml.flow.parameters
      • iaml.iaml
      • iaml.iaml_pipeline
      • iaml.logger
      • iaml.meta_explorer_step
      • iaml.meta_ordered_step
      • iaml.meta_partial_explorer_step
      • iaml.meta_singleton
      • iaml.metastep
      • iaml.metric
      • iaml.metric_plot
      • iaml.metrics
        • iaml.metrics.accuracy_metric
        • iaml.metrics.balanced_accuracy_metric
        • iaml.metrics.brier_score
        • iaml.metrics.classification_error_metric
        • iaml.metrics.concordance_index_ipcw
        • iaml.metrics.concordance_index_metric
        • iaml.metrics.cumulative_dynamic_auc
        • iaml.metrics.f1_score_metric
        • iaml.metrics.integrated_brier_score
        • iaml.metrics.integrated_brier_score_loss
        • iaml.metrics.mean_absolute_error_metric
        • iaml.metrics.mean_squared_error_metric
        • iaml.metrics.mean_squared_log_error_metric
        • iaml.metrics.median_absolute_error_metric
        • iaml.metrics.precision_metric
        • iaml.metrics.r2_score_metric
        • iaml.metrics.recall_metric
        • iaml.metrics.roc_auc_metric
        • iaml.metrics.specificity_metric
        • iaml.metrics.specificity_multiclass_metric
        • iaml.metrics.specificity_multilabel_metric
      • iaml.optimizers
        • iaml.optimizers.bayesian_optimizer
        • iaml.optimizers.genetic_optimizer
        • iaml.optimizers.optimizer
        • iaml.optimizers.random_optimizer
      • iaml.plot
      • iaml.plots
        • iaml.plots.bar_plot
        • iaml.plots.box_plot
        • iaml.plots.class_prediction_error_plot
        • iaml.plots.classification_report_plot
        • iaml.plots.confusion_matrix_plot
        • iaml.plots.correlation_heatmap_plot
        • iaml.plots.cumulative_hazard_plot
        • iaml.plots.density_plot
        • iaml.plots.histogram_plot
        • iaml.plots.kaplan_meier_comparison_plot
        • iaml.plots.line_plot
        • iaml.plots.missingness_heatmap_plot
        • iaml.plots.outlier_plot
        • iaml.plots.pair_plot
        • iaml.plots.precision_recall_curve_plot
        • iaml.plots.prediction_error_plot
        • iaml.plots.qq_plot
        • iaml.plots.residual_plot
        • iaml.plots.roc_dynamique_curve_plot
        • iaml.plots.rocauc_plot
        • iaml.plots.shap_plot
        • iaml.plots.target_distribution_plot
        • iaml.plots.violin_plot
      • iaml.predictor
      • iaml.reference
      • iaml.search_policy
      • iaml.shared_cache
      • iaml.sklearn_preprocessor
      • iaml.splitters
        • iaml.splitters.kfold_splitter
        • iaml.splitters.random_splitter
      • iaml.stack
      • iaml.statistic
      • iaml.statistics
        • iaml.statistics.anova_statistic
        • iaml.statistics.cardinality_ratio_statistic
        • iaml.statistics.category_cooccurrence_statistic
        • iaml.statistics.chi_square_statistic
        • iaml.statistics.coef_variation_statistic
        • iaml.statistics.correlation_with_target
        • iaml.statistics.count
        • iaml.statistics.data_type_summary_statistic
        • iaml.statistics.duplicate_row_statistic
        • iaml.statistics.effect_size_statistic
        • iaml.statistics.entropy_statistic
        • iaml.statistics.event_rate_statistic
        • iaml.statistics.grouped_mean_statistic
        • iaml.statistics.iqr_statistic
        • iaml.statistics.kurtosis
        • iaml.statistics.mad_statistic
        • iaml.statistics.mean
        • iaml.statistics.median_statistic
        • iaml.statistics.minmax
        • iaml.statistics.missing_rate_statistic
        • iaml.statistics.mode
        • iaml.statistics.most_frequent_ratio
        • iaml.statistics.outlier_count_iqr_statistic
        • iaml.statistics.quantile
        • iaml.statistics.range
        • iaml.statistics.rare_category_rate
        • iaml.statistics.skewness
        • iaml.statistics.stdev
        • iaml.statistics.summary_table_statistic
        • iaml.statistics.time_by_group_statistic
        • iaml.statistics.time_summary_statistic
        • iaml.statistics.top_k_value_counts
        • iaml.statistics.unique_count_statistic
        • iaml.statistics.value_counts
        • iaml.statistics.variance
        • iaml.statistics.violin
      • iaml.step
      • iaml.step_cache
      • iaml.step_wrapper
      • iaml.steps
      • iaml.study_analyses
      • iaml.timed_pool_executor
      • iaml.type_of_target
      • iaml.void_step
      • iaml.worker_manager
      • iaml.wrapper
        • iaml.wrapper.wrap_basic_gridsearch
        • iaml.wrapper.wrap_genetic_gridsearch
        • iaml.wrapper.wrap_iterative_gridsearch
  • References
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iaml.optimizers¶

All IAML optimizers

Submodules¶

  • iaml.optimizers.bayesian_optimizer
  • iaml.optimizers.genetic_optimizer
  • iaml.optimizers.optimizer
  • iaml.optimizers.random_optimizer
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iaml.optimizers.bayesian_optimizer
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